Data access for the 1,000 Plants (1KP) project
Identifieur interne : 000225 ( Main/Exploration ); précédent : 000224; suivant : 000226Data access for the 1,000 Plants (1KP) project
Auteurs : Naim Matasci [États-Unis] ; Ling-Hong Hung [États-Unis] ; Zhixiang Yan [République populaire de Chine] ; Eric J. Carpenter [Canada] ; Norman J. Wickett [États-Unis] ; Siavash Mirarab [États-Unis] ; Nam Nguyen [États-Unis] ; Tandy Warnow [États-Unis] ; Saravanaraj Ayyampalayam [États-Unis] ; Michael Barker [États-Unis] ; J Gordon Burleigh [États-Unis] ; Matthew A. Gitzendanner [États-Unis] ; Eric Wafula [États-Unis] ; Joshua P. Der [États-Unis] ; Claude W. Depamphilis [États-Unis] ; Béatrice Roure [Canada] ; Hervé Philippe [Canada, France] ; Brad R. Ruhfel [États-Unis] ; Nicholas W. Miles [États-Unis] ; Sean W. Graham [Canada] ; Sarah Mathews [États-Unis] ; Barbara Surek [Allemagne] ; Michael Melkonian [Allemagne] ; Douglas E. Soltis [États-Unis] ; Pamela S. Soltis [États-Unis] ; Carl Rothfels [États-Unis, Canada] ; Lisa Pokorny [États-Unis, Espagne] ; Jonathan A. Shaw [États-Unis] ; Lisa Degironimo [États-Unis] ; Dennis W. Stevenson [États-Unis] ; Juan Carlos Villarreal [Allemagne] ; Tao Chen [République populaire de Chine] ; Toni M. Kutchan [États-Unis] ; Megan Rolf [États-Unis] ; Regina S. Baucom [États-Unis] ; Michael K. Deyholos [Canada] ; Ram Samudrala [États-Unis] ; Zhijian Tian [République populaire de Chine] ; Xiaolei Wu [République populaire de Chine] ; Xiao Sun [République populaire de Chine] ; Yong Zhang [République populaire de Chine] ; Jun Wang [République populaire de Chine] ; Jim Leebens-Mack [États-Unis] ; Gane Ka-Shu Wong [République populaire de Chine, Canada]Source :
- GigaScience [ 2047-217X ] ; 2014.
Abstract
The 1,000 plants (1KP) project is an international multi-disciplinary consortium that has generated transcriptome data from over 1,000 plant species, with exemplars for all of the major lineages across the
Url:
DOI: 10.1186/2047-217X-3-17
PubMed: 25625010
PubMed Central: 4306014
Affiliations:
- Allemagne, Canada, Espagne, France, République populaire de Chine, États-Unis
- Arizona, Bavière, Caroline du Nord, Communauté de Madrid, District de Cologne, District de Haute-Bavière, Floride, Guangdong, Illinois, Michigan, Midi-Pyrénées, Occitanie (région administrative), Rhénanie-du-Nord-Westphalie, Washington (État)
- Cologne, Munich, Seattle, Shenzhen
- Université Louis-et-Maximilien de Munich, Université de Cologne, Université de Washington
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000686
- to stream Pmc, to step Curation: 000686
- to stream Pmc, to step Checkpoint: 000213
- to stream Ncbi, to step Merge: 000597
- to stream Ncbi, to step Curation: 000597
- to stream Ncbi, to step Checkpoint: 000597
- to stream Main, to step Merge: 000225
- to stream Main, to step Curation: 000225
Le document en format XML
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Ruhfel</name><affiliation wicri:level="2"><nlm:aff id="I10">Department of Biology, University of Florida, Gainesville, FL 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I14">Department of Biological Sciences, Eastern Kentucky University, Richmond, KY, 40475, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biological Sciences, Eastern Kentucky University, Richmond, KY, 40475</wicri:regionArea><wicri:noRegion>40475</wicri:noRegion></affiliation></author><author><name sortKey="Miles, Nicholas W" sort="Miles, Nicholas W" uniqKey="Miles N" first="Nicholas W" last="Miles">Nicholas W. Miles</name><affiliation wicri:level="1"><nlm:aff id="I15">Florida Museum of Natural History, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Florida Museum of Natural History, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation></author><author><name sortKey="Graham, Sean W" sort="Graham, Sean W" uniqKey="Graham S" first="Sean W" last="Graham">Sean W. Graham</name><affiliation wicri:level="1"><nlm:aff id="I16">Department of Botany, University of British Columbia, Vancouver, BC V6T 1Z4, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Botany, University of British Columbia, Vancouver, BC V6T 1Z4</wicri:regionArea><wicri:noRegion>BC V6T 1Z4</wicri:noRegion></affiliation></author><author><name sortKey="Mathews, Sarah" sort="Mathews, Sarah" uniqKey="Mathews S" first="Sarah" last="Mathews">Sarah Mathews</name><affiliation wicri:level="1"><nlm:aff id="I17">Arnold Arboretum of Harvard University, Cambridge, MA, 02138, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Arnold Arboretum of Harvard University, Cambridge, MA, 02138</wicri:regionArea><wicri:noRegion>02138</wicri:noRegion></affiliation></author><author><name sortKey="Surek, Barbara" sort="Surek, Barbara" uniqKey="Surek B" first="Barbara" last="Surek">Barbara Surek</name><affiliation wicri:level="4"><nlm:aff id="I18">Botanical Institute, Universität zu Köln, Köln D-50674, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Botanical Institute, Universität zu Köln, Köln D-50674</wicri:regionArea><placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region><region type="district" nuts="2">District de Cologne</region><settlement type="city">Cologne</settlement></placeName><orgName type="university">Université de Cologne</orgName></affiliation></author><author><name sortKey="Melkonian, Michael" sort="Melkonian, Michael" uniqKey="Melkonian M" first="Michael" last="Melkonian">Michael Melkonian</name><affiliation wicri:level="4"><nlm:aff id="I18">Botanical Institute, Universität zu Köln, Köln D-50674, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Botanical Institute, Universität zu Köln, Köln D-50674</wicri:regionArea><placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region><region type="district" nuts="2">District de Cologne</region><settlement type="city">Cologne</settlement></placeName><orgName type="university">Université de Cologne</orgName></affiliation></author><author><name sortKey="Soltis, Douglas E" sort="Soltis, Douglas E" uniqKey="Soltis D" first="Douglas E" last="Soltis">Douglas E. Soltis</name><affiliation wicri:level="2"><nlm:aff id="I10">Department of Biology, University of Florida, Gainesville, FL 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I15">Florida Museum of Natural History, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Florida Museum of Natural History, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I19">Genetics Institute, University of Florida, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Genetics Institute, University of Florida, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation></author><author><name sortKey="Soltis, Pamela S" sort="Soltis, Pamela S" uniqKey="Soltis P" first="Pamela S" last="Soltis">Pamela S. Soltis</name><affiliation wicri:level="2"><nlm:aff id="I10">Department of Biology, University of Florida, Gainesville, FL 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I15">Florida Museum of Natural History, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Florida Museum of Natural History, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I19">Genetics Institute, University of Florida, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Genetics Institute, University of Florida, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation></author><author><name sortKey="Rothfels, Carl" sort="Rothfels, Carl" uniqKey="Rothfels C" first="Carl" last="Rothfels">Carl Rothfels</name><affiliation wicri:level="2"><nlm:aff id="I20">Department of Biology, Duke University, Durham, NC 27708, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Duke University, Durham, NC 27708</wicri:regionArea><placeName><region type="state">Caroline du Nord</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I21">Department of Zoology, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Zoology, University of British Columbia, Vancouver, BC, V6T 1Z4</wicri:regionArea><wicri:noRegion>V6T 1Z4</wicri:noRegion></affiliation></author><author><name sortKey="Pokorny, Lisa" sort="Pokorny, Lisa" uniqKey="Pokorny L" first="Lisa" last="Pokorny">Lisa Pokorny</name><affiliation wicri:level="2"><nlm:aff id="I20">Department of Biology, Duke University, Durham, NC 27708, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Duke University, Durham, NC 27708</wicri:regionArea><placeName><region type="state">Caroline du Nord</region></placeName></affiliation><affiliation wicri:level="2"><nlm:aff id="I22">Department of Biodiversity and Conservation, Real Jardín Botánico (RJB-CSIC), 28014 Madrid, Spain</nlm:aff><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Biodiversity and Conservation, Real Jardín Botánico (RJB-CSIC), 28014 Madrid</wicri:regionArea><placeName><region nuts="2" type="communauté">Communauté de Madrid</region></placeName></affiliation></author><author><name sortKey="Shaw, Jonathan A" sort="Shaw, Jonathan A" uniqKey="Shaw J" first="Jonathan A" last="Shaw">Jonathan A. Shaw</name><affiliation wicri:level="2"><nlm:aff id="I20">Department of Biology, Duke University, Durham, NC 27708, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Duke University, Durham, NC 27708</wicri:regionArea><placeName><region type="state">Caroline du Nord</region></placeName></affiliation></author><author><name sortKey="Degironimo, Lisa" sort="Degironimo, Lisa" uniqKey="Degironimo L" first="Lisa" last="Degironimo">Lisa Degironimo</name><affiliation wicri:level="1"><nlm:aff id="I23">New York Botanical Garden, Bronx, NY, 10458, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>New York Botanical Garden, Bronx, NY, 10458</wicri:regionArea><wicri:noRegion>10458</wicri:noRegion></affiliation></author><author><name sortKey="Stevenson, Dennis W" sort="Stevenson, Dennis W" uniqKey="Stevenson D" first="Dennis W" last="Stevenson">Dennis W. Stevenson</name><affiliation wicri:level="1"><nlm:aff id="I23">New York Botanical Garden, Bronx, NY, 10458, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>New York Botanical Garden, Bronx, NY, 10458</wicri:regionArea><wicri:noRegion>10458</wicri:noRegion></affiliation></author><author><name sortKey="Villarreal, Juan Carlos" sort="Villarreal, Juan Carlos" uniqKey="Villarreal J" first="Juan Carlos" last="Villarreal">Juan Carlos Villarreal</name><affiliation wicri:level="4"><nlm:aff id="I24">Systematic Botany and Mycology, University of Munich (LMU), Menzinger Str. 67, 80638 Munich, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Systematic Botany and Mycology, University of Munich (LMU), Menzinger Str. 67, 80638 Munich</wicri:regionArea><placeName><region type="land" nuts="1">Bavière</region><region type="district" nuts="2">District de Haute-Bavière</region><settlement type="city">Munich</settlement></placeName><orgName type="university">Université Louis-et-Maximilien de Munich</orgName></affiliation></author><author><name sortKey="Chen, Tao" sort="Chen, Tao" uniqKey="Chen T" first="Tao" last="Chen">Tao Chen</name><affiliation wicri:level="1"><nlm:aff id="I25">Shenzhen Fairy Lake Botanical Garden, The Chinese Academy of Sciences, Shenzhen, Guangdong, 518004, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Shenzhen Fairy Lake Botanical Garden, The Chinese Academy of Sciences, Shenzhen, Guangdong, 518004</wicri:regionArea><wicri:noRegion>518004</wicri:noRegion></affiliation></author><author><name sortKey="Kutchan, Toni M" sort="Kutchan, Toni M" uniqKey="Kutchan T" first="Toni M" last="Kutchan">Toni M. Kutchan</name><affiliation wicri:level="1"><nlm:aff id="I26">Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Donald Danforth Plant Science Center, St. Louis, MO, 63132</wicri:regionArea><wicri:noRegion>63132</wicri:noRegion></affiliation></author><author><name sortKey="Rolf, Megan" sort="Rolf, Megan" uniqKey="Rolf M" first="Megan" last="Rolf">Megan Rolf</name><affiliation wicri:level="1"><nlm:aff id="I26">Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Donald Danforth Plant Science Center, St. Louis, MO, 63132</wicri:regionArea><wicri:noRegion>63132</wicri:noRegion></affiliation></author><author><name sortKey="Baucom, Regina S" sort="Baucom, Regina S" uniqKey="Baucom R" first="Regina S" last="Baucom">Regina S. Baucom</name><affiliation wicri:level="2"><nlm:aff id="I27">Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI</wicri:regionArea><placeName><region type="state">Michigan</region></placeName></affiliation></author><author><name sortKey="Deyholos, Michael K" sort="Deyholos, Michael K" uniqKey="Deyholos M" first="Michael K" last="Deyholos">Michael K. Deyholos</name><affiliation wicri:level="1"><nlm:aff id="I5">Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB</wicri:regionArea><wicri:noRegion>AB</wicri:noRegion></affiliation></author><author><name sortKey="Samudrala, Ram" sort="Samudrala, Ram" uniqKey="Samudrala R" first="Ram" last="Samudrala">Ram Samudrala</name><affiliation wicri:level="4"><nlm:aff id="I3">Department of Microbiology, University of Washington, Seattle 98109, WA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Microbiology, University of Washington, Seattle 98109, WA</wicri:regionArea><placeName><region type="state">Washington (État)</region><settlement type="city">Seattle</settlement></placeName><orgName type="university">Université de Washington</orgName></affiliation></author><author><name sortKey="Tian, Zhijian" sort="Tian, Zhijian" uniqKey="Tian Z" first="Zhijian" last="Tian">Zhijian Tian</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Wu, Xiaolei" sort="Wu, Xiaolei" uniqKey="Wu X" first="Xiaolei" last="Wu">Xiaolei Wu</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Sun, Xiao" sort="Sun, Xiao" uniqKey="Sun X" first="Xiao" last="Sun">Xiao Sun</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Zhang, Yong" sort="Zhang, Yong" uniqKey="Zhang Y" first="Yong" last="Zhang">Yong Zhang</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Wang, Jun" sort="Wang, Jun" uniqKey="Wang J" first="Jun" last="Wang">Jun Wang</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Leebens Mack, Jim" sort="Leebens Mack, Jim" uniqKey="Leebens Mack J" first="Jim" last="Leebens-Mack">Jim Leebens-Mack</name><affiliation wicri:level="1"><nlm:aff id="I9">Department of Plant Biology, University of Georgia, Athens, GA, 30602, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Biology, University of Georgia, Athens, GA, 30602</wicri:regionArea><wicri:noRegion>30602</wicri:noRegion></affiliation></author><author><name sortKey="Wong, Gane Ka Shu" sort="Wong, Gane Ka Shu" uniqKey="Wong G" first="Gane Ka-Shu" last="Wong">Gane Ka-Shu Wong</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I5">Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB</wicri:regionArea><wicri:noRegion>AB</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I28">Department of Medicine, University of Alberta, Edmonton, AB, T6G 2E1, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Medicine, University of Alberta, Edmonton, AB, T6G 2E1</wicri:regionArea><wicri:noRegion>T6G 2E1</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25625010</idno><idno type="pmc">4306014</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4306014</idno><idno type="RBID">PMC:4306014</idno><idno type="doi">10.1186/2047-217X-3-17</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">000686</idno><idno type="wicri:Area/Pmc/Curation">000686</idno><idno type="wicri:Area/Pmc/Checkpoint">000213</idno><idno type="wicri:Area/Ncbi/Merge">000597</idno><idno type="wicri:Area/Ncbi/Curation">000597</idno><idno type="wicri:Area/Ncbi/Checkpoint">000597</idno><idno type="wicri:Area/Main/Merge">000225</idno><idno type="wicri:Area/Main/Curation">000225</idno><idno type="wicri:Area/Main/Exploration">000225</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Data access for the 1,000 Plants (1KP) project</title><author><name sortKey="Matasci, Naim" sort="Matasci, Naim" uniqKey="Matasci N" first="Naim" last="Matasci">Naim Matasci</name><affiliation wicri:level="2"><nlm:aff id="I1">iPlant Collaborative, Tucson 85721, AZ, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>iPlant Collaborative, Tucson 85721, AZ</wicri:regionArea><placeName><region type="state">Arizona</region></placeName></affiliation><affiliation wicri:level="2"><nlm:aff id="I2">Department of Ecology and Evolutionary Biology, University of Arizona, Tucson 85721, AZ, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Ecology and Evolutionary Biology, University of Arizona, Tucson 85721, AZ</wicri:regionArea><placeName><region type="state">Arizona</region></placeName></affiliation></author><author><name sortKey="Hung, Ling Hong" sort="Hung, Ling Hong" uniqKey="Hung L" first="Ling-Hong" last="Hung">Ling-Hong Hung</name><affiliation wicri:level="4"><nlm:aff id="I3">Department of Microbiology, University of Washington, Seattle 98109, WA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Microbiology, University of Washington, Seattle 98109, WA</wicri:regionArea><placeName><region type="state">Washington (État)</region><settlement type="city">Seattle</settlement></placeName><orgName type="university">Université de Washington</orgName></affiliation></author><author><name sortKey="Yan, Zhixiang" sort="Yan, Zhixiang" uniqKey="Yan Z" first="Zhixiang" last="Yan">Zhixiang Yan</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Carpenter, Eric J" sort="Carpenter, Eric J" uniqKey="Carpenter E" first="Eric J" last="Carpenter">Eric J. Carpenter</name><affiliation wicri:level="1"><nlm:aff id="I5">Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB</wicri:regionArea><wicri:noRegion>AB</wicri:noRegion></affiliation></author><author><name sortKey="Wickett, Norman J" sort="Wickett, Norman J" uniqKey="Wickett N" first="Norman J" last="Wickett">Norman J. Wickett</name><affiliation wicri:level="2"><nlm:aff id="I6">Chicago Botanic Garden, Glencoe 60022, IL, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Chicago Botanic Garden, Glencoe 60022, IL</wicri:regionArea><placeName><region type="state">Illinois</region></placeName></affiliation><affiliation wicri:level="2"><nlm:aff id="I7">Program in Biological Sciences, Northwestern University, Evanston 60208, IL, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Program in Biological Sciences, Northwestern University, Evanston 60208, IL</wicri:regionArea><placeName><region type="state">Illinois</region></placeName></affiliation></author><author><name sortKey="Mirarab, Siavash" sort="Mirarab, Siavash" uniqKey="Mirarab S" first="Siavash" last="Mirarab">Siavash Mirarab</name><affiliation wicri:level="1"><nlm:aff id="I8">Department of Computer Science, University of Texas, Austin, TX, 78712, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer Science, University of Texas, Austin, TX, 78712</wicri:regionArea><wicri:noRegion>78712</wicri:noRegion></affiliation></author><author><name sortKey="Nguyen, Nam" sort="Nguyen, Nam" uniqKey="Nguyen N" first="Nam" last="Nguyen">Nam Nguyen</name><affiliation wicri:level="1"><nlm:aff id="I8">Department of Computer Science, University of Texas, Austin, TX, 78712, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer Science, University of Texas, Austin, TX, 78712</wicri:regionArea><wicri:noRegion>78712</wicri:noRegion></affiliation></author><author><name sortKey="Warnow, Tandy" sort="Warnow, Tandy" uniqKey="Warnow T" first="Tandy" last="Warnow">Tandy Warnow</name><affiliation wicri:level="1"><nlm:aff id="I8">Department of Computer Science, University of Texas, Austin, TX, 78712, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Computer Science, University of Texas, Austin, TX, 78712</wicri:regionArea><wicri:noRegion>78712</wicri:noRegion></affiliation></author><author><name sortKey="Ayyampalayam, Saravanaraj" sort="Ayyampalayam, Saravanaraj" uniqKey="Ayyampalayam S" first="Saravanaraj" last="Ayyampalayam">Saravanaraj Ayyampalayam</name><affiliation wicri:level="1"><nlm:aff id="I9">Department of Plant Biology, University of Georgia, Athens, GA, 30602, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Biology, University of Georgia, Athens, GA, 30602</wicri:regionArea><wicri:noRegion>30602</wicri:noRegion></affiliation></author><author><name sortKey="Barker, Michael" sort="Barker, Michael" uniqKey="Barker M" first="Michael" last="Barker">Michael Barker</name><affiliation wicri:level="2"><nlm:aff id="I2">Department of Ecology and Evolutionary Biology, University of Arizona, Tucson 85721, AZ, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Ecology and Evolutionary Biology, University of Arizona, Tucson 85721, AZ</wicri:regionArea><placeName><region type="state">Arizona</region></placeName></affiliation></author><author><name sortKey="Burleigh, J Gordon" sort="Burleigh, J Gordon" uniqKey="Burleigh J" first="J Gordon" last="Burleigh">J Gordon Burleigh</name><affiliation wicri:level="2"><nlm:aff id="I10">Department of Biology, University of Florida, Gainesville, FL 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Gitzendanner, Matthew A" sort="Gitzendanner, Matthew A" uniqKey="Gitzendanner M" first="Matthew A" last="Gitzendanner">Matthew A. Gitzendanner</name><affiliation wicri:level="2"><nlm:aff id="I10">Department of Biology, University of Florida, Gainesville, FL 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation></author><author><name sortKey="Wafula, Eric" sort="Wafula, Eric" uniqKey="Wafula E" first="Eric" last="Wafula">Eric Wafula</name><affiliation wicri:level="1"><nlm:aff id="I11">Department of Biology, Penn State University, University Park, Pennsylvania, PA, 16801, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Penn State University, University Park, Pennsylvania, PA, 16801</wicri:regionArea><wicri:noRegion>16801</wicri:noRegion></affiliation></author><author><name sortKey="Der, Joshua P" sort="Der, Joshua P" uniqKey="Der J" first="Joshua P" last="Der">Joshua P. Der</name><affiliation wicri:level="1"><nlm:aff id="I11">Department of Biology, Penn State University, University Park, Pennsylvania, PA, 16801, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Penn State University, University Park, Pennsylvania, PA, 16801</wicri:regionArea><wicri:noRegion>16801</wicri:noRegion></affiliation></author><author><name sortKey="Depamphilis, Claude W" sort="Depamphilis, Claude W" uniqKey="Depamphilis C" first="Claude W" last="Depamphilis">Claude W. Depamphilis</name><affiliation wicri:level="1"><nlm:aff id="I11">Department of Biology, Penn State University, University Park, Pennsylvania, PA, 16801, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Penn State University, University Park, Pennsylvania, PA, 16801</wicri:regionArea><wicri:noRegion>16801</wicri:noRegion></affiliation></author><author><name sortKey="Roure, Beatrice" sort="Roure, Beatrice" uniqKey="Roure B" first="Béatrice" last="Roure">Béatrice Roure</name><affiliation wicri:level="1"><nlm:aff id="I12">Département de Biochimie, Centre Robert-Cedergren, Université de Montréal, Succursale Centre-Ville, Montréal, Québec H3C3J7, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Département de Biochimie, Centre Robert-Cedergren, Université de Montréal, Succursale Centre-Ville, Montréal, Québec H3C3J7</wicri:regionArea><wicri:noRegion>Québec H3C3J7</wicri:noRegion></affiliation></author><author><name sortKey="Philippe, Herve" sort="Philippe, Herve" uniqKey="Philippe H" first="Hervé" last="Philippe">Hervé Philippe</name><affiliation wicri:level="1"><nlm:aff id="I12">Département de Biochimie, Centre Robert-Cedergren, Université de Montréal, Succursale Centre-Ville, Montréal, Québec H3C3J7, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Département de Biochimie, Centre Robert-Cedergren, Université de Montréal, Succursale Centre-Ville, Montréal, Québec H3C3J7</wicri:regionArea><wicri:noRegion>Québec H3C3J7</wicri:noRegion></affiliation><affiliation wicri:level="3"><nlm:aff id="I13">CNRS, USR 2936, Station d’ Ecologie Expérimentale du CNRS, Moulis 09200, France</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea>CNRS, USR 2936, Station d’ Ecologie Expérimentale du CNRS, Moulis 09200</wicri:regionArea><placeName><region type="region" nuts="2">Occitanie (région administrative)</region><region type="old region" nuts="2">Midi-Pyrénées</region></placeName></affiliation></author><author><name sortKey="Ruhfel, Brad R" sort="Ruhfel, Brad R" uniqKey="Ruhfel B" first="Brad R" last="Ruhfel">Brad R. Ruhfel</name><affiliation wicri:level="2"><nlm:aff id="I10">Department of Biology, University of Florida, Gainesville, FL 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I14">Department of Biological Sciences, Eastern Kentucky University, Richmond, KY, 40475, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biological Sciences, Eastern Kentucky University, Richmond, KY, 40475</wicri:regionArea><wicri:noRegion>40475</wicri:noRegion></affiliation></author><author><name sortKey="Miles, Nicholas W" sort="Miles, Nicholas W" uniqKey="Miles N" first="Nicholas W" last="Miles">Nicholas W. Miles</name><affiliation wicri:level="1"><nlm:aff id="I15">Florida Museum of Natural History, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Florida Museum of Natural History, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation></author><author><name sortKey="Graham, Sean W" sort="Graham, Sean W" uniqKey="Graham S" first="Sean W" last="Graham">Sean W. Graham</name><affiliation wicri:level="1"><nlm:aff id="I16">Department of Botany, University of British Columbia, Vancouver, BC V6T 1Z4, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Botany, University of British Columbia, Vancouver, BC V6T 1Z4</wicri:regionArea><wicri:noRegion>BC V6T 1Z4</wicri:noRegion></affiliation></author><author><name sortKey="Mathews, Sarah" sort="Mathews, Sarah" uniqKey="Mathews S" first="Sarah" last="Mathews">Sarah Mathews</name><affiliation wicri:level="1"><nlm:aff id="I17">Arnold Arboretum of Harvard University, Cambridge, MA, 02138, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Arnold Arboretum of Harvard University, Cambridge, MA, 02138</wicri:regionArea><wicri:noRegion>02138</wicri:noRegion></affiliation></author><author><name sortKey="Surek, Barbara" sort="Surek, Barbara" uniqKey="Surek B" first="Barbara" last="Surek">Barbara Surek</name><affiliation wicri:level="4"><nlm:aff id="I18">Botanical Institute, Universität zu Köln, Köln D-50674, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Botanical Institute, Universität zu Köln, Köln D-50674</wicri:regionArea><placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region><region type="district" nuts="2">District de Cologne</region><settlement type="city">Cologne</settlement></placeName><orgName type="university">Université de Cologne</orgName></affiliation></author><author><name sortKey="Melkonian, Michael" sort="Melkonian, Michael" uniqKey="Melkonian M" first="Michael" last="Melkonian">Michael Melkonian</name><affiliation wicri:level="4"><nlm:aff id="I18">Botanical Institute, Universität zu Köln, Köln D-50674, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Botanical Institute, Universität zu Köln, Köln D-50674</wicri:regionArea><placeName><region type="land" nuts="1">Rhénanie-du-Nord-Westphalie</region><region type="district" nuts="2">District de Cologne</region><settlement type="city">Cologne</settlement></placeName><orgName type="university">Université de Cologne</orgName></affiliation></author><author><name sortKey="Soltis, Douglas E" sort="Soltis, Douglas E" uniqKey="Soltis D" first="Douglas E" last="Soltis">Douglas E. Soltis</name><affiliation wicri:level="2"><nlm:aff id="I10">Department of Biology, University of Florida, Gainesville, FL 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I15">Florida Museum of Natural History, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Florida Museum of Natural History, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I19">Genetics Institute, University of Florida, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Genetics Institute, University of Florida, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation></author><author><name sortKey="Soltis, Pamela S" sort="Soltis, Pamela S" uniqKey="Soltis P" first="Pamela S" last="Soltis">Pamela S. Soltis</name><affiliation wicri:level="2"><nlm:aff id="I10">Department of Biology, University of Florida, Gainesville, FL 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, University of Florida, Gainesville, FL 32611</wicri:regionArea><placeName><region type="state">Floride</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I15">Florida Museum of Natural History, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Florida Museum of Natural History, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I19">Genetics Institute, University of Florida, Gainesville, FL, 32611, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Genetics Institute, University of Florida, Gainesville, FL, 32611</wicri:regionArea><wicri:noRegion>32611</wicri:noRegion></affiliation></author><author><name sortKey="Rothfels, Carl" sort="Rothfels, Carl" uniqKey="Rothfels C" first="Carl" last="Rothfels">Carl Rothfels</name><affiliation wicri:level="2"><nlm:aff id="I20">Department of Biology, Duke University, Durham, NC 27708, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Duke University, Durham, NC 27708</wicri:regionArea><placeName><region type="state">Caroline du Nord</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I21">Department of Zoology, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Zoology, University of British Columbia, Vancouver, BC, V6T 1Z4</wicri:regionArea><wicri:noRegion>V6T 1Z4</wicri:noRegion></affiliation></author><author><name sortKey="Pokorny, Lisa" sort="Pokorny, Lisa" uniqKey="Pokorny L" first="Lisa" last="Pokorny">Lisa Pokorny</name><affiliation wicri:level="2"><nlm:aff id="I20">Department of Biology, Duke University, Durham, NC 27708, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Duke University, Durham, NC 27708</wicri:regionArea><placeName><region type="state">Caroline du Nord</region></placeName></affiliation><affiliation wicri:level="2"><nlm:aff id="I22">Department of Biodiversity and Conservation, Real Jardín Botánico (RJB-CSIC), 28014 Madrid, Spain</nlm:aff><country xml:lang="fr">Espagne</country><wicri:regionArea>Department of Biodiversity and Conservation, Real Jardín Botánico (RJB-CSIC), 28014 Madrid</wicri:regionArea><placeName><region nuts="2" type="communauté">Communauté de Madrid</region></placeName></affiliation></author><author><name sortKey="Shaw, Jonathan A" sort="Shaw, Jonathan A" uniqKey="Shaw J" first="Jonathan A" last="Shaw">Jonathan A. Shaw</name><affiliation wicri:level="2"><nlm:aff id="I20">Department of Biology, Duke University, Durham, NC 27708, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Biology, Duke University, Durham, NC 27708</wicri:regionArea><placeName><region type="state">Caroline du Nord</region></placeName></affiliation></author><author><name sortKey="Degironimo, Lisa" sort="Degironimo, Lisa" uniqKey="Degironimo L" first="Lisa" last="Degironimo">Lisa Degironimo</name><affiliation wicri:level="1"><nlm:aff id="I23">New York Botanical Garden, Bronx, NY, 10458, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>New York Botanical Garden, Bronx, NY, 10458</wicri:regionArea><wicri:noRegion>10458</wicri:noRegion></affiliation></author><author><name sortKey="Stevenson, Dennis W" sort="Stevenson, Dennis W" uniqKey="Stevenson D" first="Dennis W" last="Stevenson">Dennis W. Stevenson</name><affiliation wicri:level="1"><nlm:aff id="I23">New York Botanical Garden, Bronx, NY, 10458, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>New York Botanical Garden, Bronx, NY, 10458</wicri:regionArea><wicri:noRegion>10458</wicri:noRegion></affiliation></author><author><name sortKey="Villarreal, Juan Carlos" sort="Villarreal, Juan Carlos" uniqKey="Villarreal J" first="Juan Carlos" last="Villarreal">Juan Carlos Villarreal</name><affiliation wicri:level="4"><nlm:aff id="I24">Systematic Botany and Mycology, University of Munich (LMU), Menzinger Str. 67, 80638 Munich, Germany</nlm:aff><country xml:lang="fr">Allemagne</country><wicri:regionArea>Systematic Botany and Mycology, University of Munich (LMU), Menzinger Str. 67, 80638 Munich</wicri:regionArea><placeName><region type="land" nuts="1">Bavière</region><region type="district" nuts="2">District de Haute-Bavière</region><settlement type="city">Munich</settlement></placeName><orgName type="university">Université Louis-et-Maximilien de Munich</orgName></affiliation></author><author><name sortKey="Chen, Tao" sort="Chen, Tao" uniqKey="Chen T" first="Tao" last="Chen">Tao Chen</name><affiliation wicri:level="1"><nlm:aff id="I25">Shenzhen Fairy Lake Botanical Garden, The Chinese Academy of Sciences, Shenzhen, Guangdong, 518004, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>Shenzhen Fairy Lake Botanical Garden, The Chinese Academy of Sciences, Shenzhen, Guangdong, 518004</wicri:regionArea><wicri:noRegion>518004</wicri:noRegion></affiliation></author><author><name sortKey="Kutchan, Toni M" sort="Kutchan, Toni M" uniqKey="Kutchan T" first="Toni M" last="Kutchan">Toni M. Kutchan</name><affiliation wicri:level="1"><nlm:aff id="I26">Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Donald Danforth Plant Science Center, St. Louis, MO, 63132</wicri:regionArea><wicri:noRegion>63132</wicri:noRegion></affiliation></author><author><name sortKey="Rolf, Megan" sort="Rolf, Megan" uniqKey="Rolf M" first="Megan" last="Rolf">Megan Rolf</name><affiliation wicri:level="1"><nlm:aff id="I26">Donald Danforth Plant Science Center, St. Louis, MO, 63132, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Donald Danforth Plant Science Center, St. Louis, MO, 63132</wicri:regionArea><wicri:noRegion>63132</wicri:noRegion></affiliation></author><author><name sortKey="Baucom, Regina S" sort="Baucom, Regina S" uniqKey="Baucom R" first="Regina S" last="Baucom">Regina S. Baucom</name><affiliation wicri:level="2"><nlm:aff id="I27">Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI</wicri:regionArea><placeName><region type="state">Michigan</region></placeName></affiliation></author><author><name sortKey="Deyholos, Michael K" sort="Deyholos, Michael K" uniqKey="Deyholos M" first="Michael K" last="Deyholos">Michael K. Deyholos</name><affiliation wicri:level="1"><nlm:aff id="I5">Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB</wicri:regionArea><wicri:noRegion>AB</wicri:noRegion></affiliation></author><author><name sortKey="Samudrala, Ram" sort="Samudrala, Ram" uniqKey="Samudrala R" first="Ram" last="Samudrala">Ram Samudrala</name><affiliation wicri:level="4"><nlm:aff id="I3">Department of Microbiology, University of Washington, Seattle 98109, WA, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Microbiology, University of Washington, Seattle 98109, WA</wicri:regionArea><placeName><region type="state">Washington (État)</region><settlement type="city">Seattle</settlement></placeName><orgName type="university">Université de Washington</orgName></affiliation></author><author><name sortKey="Tian, Zhijian" sort="Tian, Zhijian" uniqKey="Tian Z" first="Zhijian" last="Tian">Zhijian Tian</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Wu, Xiaolei" sort="Wu, Xiaolei" uniqKey="Wu X" first="Xiaolei" last="Wu">Xiaolei Wu</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Sun, Xiao" sort="Sun, Xiao" uniqKey="Sun X" first="Xiao" last="Sun">Xiao Sun</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Zhang, Yong" sort="Zhang, Yong" uniqKey="Zhang Y" first="Yong" last="Zhang">Yong Zhang</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Wang, Jun" sort="Wang, Jun" uniqKey="Wang J" first="Jun" last="Wang">Jun Wang</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation></author><author><name sortKey="Leebens Mack, Jim" sort="Leebens Mack, Jim" uniqKey="Leebens Mack J" first="Jim" last="Leebens-Mack">Jim Leebens-Mack</name><affiliation wicri:level="1"><nlm:aff id="I9">Department of Plant Biology, University of Georgia, Athens, GA, 30602, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Biology, University of Georgia, Athens, GA, 30602</wicri:regionArea><wicri:noRegion>30602</wicri:noRegion></affiliation></author><author><name sortKey="Wong, Gane Ka Shu" sort="Wong, Gane Ka Shu" uniqKey="Wong G" first="Gane Ka-Shu" last="Wong">Gane Ka-Shu Wong</name><affiliation wicri:level="3"><nlm:aff id="I4">BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen, China</nlm:aff><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>BGI-Shenzhen, Bei Shan Industrial Zone, Shenzhen</wicri:regionArea><placeName><settlement type="city">Shenzhen</settlement><region type="province">Guangdong</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="I5">Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Biological Sciences, University of Alberta, Edmonton T6G 2E9, AB</wicri:regionArea><wicri:noRegion>AB</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="I28">Department of Medicine, University of Alberta, Edmonton, AB, T6G 2E1, Canada</nlm:aff><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Medicine, University of Alberta, Edmonton, AB, T6G 2E1</wicri:regionArea><wicri:noRegion>T6G 2E1</wicri:noRegion></affiliation></author></analytic><series><title level="j">GigaScience</title><idno type="eISSN">2047-217X</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The 1,000 plants (1KP) project is an international multi-disciplinary consortium that has generated transcriptome data from over 1,000 plant species, with exemplars for all of the major lineages across the <italic>Viridiplantae</italic> (green plants) clade. Here, we describe how to access the data used in a phylogenomics analysis of the first 85 species, and how to visualize our gene and species trees. Users can develop computational pipelines to analyse these data, in conjunction with data of their own that they can upload. Computationally estimated protein-protein interactions and biochemical pathways can be visualized at another site. Finally, we comment on our future plans and how they fit within this scalable system for the dissemination, visualization, and analysis of large multi-species data sets.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Goff, Sa" uniqKey="Goff S">SA Goff</name></author><author><name sortKey="Vaughn, M" uniqKey="Vaughn M">M Vaughn</name></author><author><name sortKey="Mckay, S" uniqKey="Mckay S">S McKay</name></author><author><name sortKey="Lyons, E" uniqKey="Lyons E">E Lyons</name></author><author><name sortKey="Stapleton, Ae" uniqKey="Stapleton A">AE Stapleton</name></author><author><name sortKey="Gessler, D" uniqKey="Gessler D">D Gessler</name></author><author><name sortKey="Matasci, N" uniqKey="Matasci N">N Matasci</name></author><author><name sortKey="Wang, L" uniqKey="Wang L">L Wang</name></author><author><name sortKey="Hanlon, M" uniqKey="Hanlon M">M Hanlon</name></author><author><name sortKey="Lenards, A" uniqKey="Lenards A">A Lenards</name></author><author><name sortKey="Muir, A" uniqKey="Muir A">A Muir</name></author><author><name sortKey="Merchant, N" uniqKey="Merchant N">N Merchant</name></author><author><name sortKey="Lowry, S" uniqKey="Lowry S">S Lowry</name></author><author><name sortKey="Mock, S" uniqKey="Mock S">S Mock</name></author><author><name sortKey="Helmke, M" uniqKey="Helmke M">M Helmke</name></author><author><name sortKey="Kubach, A" uniqKey="Kubach A">A Kubach</name></author><author><name sortKey="Narro, M" uniqKey="Narro M">M Narro</name></author><author><name sortKey="Hopkins, N" uniqKey="Hopkins N">N Hopkins</name></author><author><name sortKey="Micklos, D" uniqKey="Micklos D">D Micklos</name></author><author><name sortKey="Hilgert, U" uniqKey="Hilgert U">U Hilgert</name></author><author><name sortKey="Gonzales, M" uniqKey="Gonzales M">M Gonzales</name></author><author><name sortKey="Jordan, C" uniqKey="Jordan C">C Jordan</name></author><author><name sortKey="Skidmore, E" uniqKey="Skidmore E">E Skidmore</name></author><author><name sortKey="Dooley, R" uniqKey="Dooley R">R Dooley</name></author><author><name sortKey="Cazes, J" uniqKey="Cazes J">J Cazes</name></author><author><name sortKey="Mclay, R" uniqKey="Mclay R">R McLay</name></author><author><name sortKey="Lu, Z" uniqKey="Lu Z">Z Lu</name></author><author><name sortKey="Pasternak, S" uniqKey="Pasternak S">S Pasternak</name></author><author><name sortKey="Koesterke, L" uniqKey="Koesterke L">L Koesterke</name></author><author><name sortKey="Piel, Wh" uniqKey="Piel W">WH Piel</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Johnson, Mt" uniqKey="Johnson M">MT Johnson</name></author><author><name sortKey="Carpenter, Ej" uniqKey="Carpenter E">EJ Carpenter</name></author><author><name sortKey="Tian, Z" uniqKey="Tian Z">Z Tian</name></author><author><name sortKey="Bruskiewich, R" uniqKey="Bruskiewich R">R Bruskiewich</name></author><author><name 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uniqKey="Kutchan T">TM Kutchan</name></author><author><name sortKey="Leebens Mack, J" uniqKey="Leebens Mack J">J Leebens-Mack</name></author><author><name sortKey="Melkonian, M" uniqKey="Melkonian M">M Melkonian</name></author><author><name sortKey="Miles, N" uniqKey="Miles N">N Miles</name></author><author><name sortKey="Myburg, H" uniqKey="Myburg H">H Myburg</name></author><author><name sortKey="Patterson, J" uniqKey="Patterson J">J Patterson</name></author><author><name sortKey="Pires, Jc" uniqKey="Pires J">JC Pires</name></author><author><name sortKey="Ralph, P" uniqKey="Ralph P">P Ralph</name></author><author><name sortKey="Rolf, M" uniqKey="Rolf M">M Rolf</name></author><author><name sortKey="Sage, Rf" uniqKey="Sage R">RF Sage</name></author><author><name sortKey="Soltis, D" uniqKey="Soltis D">D Soltis</name></author><author><name sortKey="Soltis, P" uniqKey="Soltis P">P Soltis</name></author><author><name sortKey="Stevenson, D" uniqKey="Stevenson D">D 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Lam</name></author><author><name sortKey="Li, Y" uniqKey="Li Y">Y Li</name></author><author><name sortKey="Xu, X" uniqKey="Xu X">X Xu</name></author><author><name sortKey="Wong, Gk" uniqKey="Wong G">GK Wong</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Wickett, Nj" uniqKey="Wickett N">NJ Wickett</name></author><author><name sortKey="Mirarab, S" uniqKey="Mirarab S">S Mirarab</name></author><author><name sortKey="Nguyen, N" uniqKey="Nguyen N">N Nguyen</name></author><author><name sortKey="Warnow, T" uniqKey="Warnow T">T Warnow</name></author><author><name sortKey="Carpenter, E" uniqKey="Carpenter E">E Carpenter</name></author><author><name sortKey="Matasci, N" uniqKey="Matasci N">N Matasci</name></author><author><name sortKey="Ayyampalayam, S" uniqKey="Ayyampalayam S">S Ayyampalayam</name></author><author><name sortKey="Barker, M" uniqKey="Barker M">M Barker</name></author><author><name sortKey="Burleigh, Jg" uniqKey="Burleigh J">JG Burleigh</name></author><author><name sortKey="Gitzendanner, Ma" uniqKey="Gitzendanner M">MA Gitzendanner</name></author><author><name sortKey="Ruhfel, B" uniqKey="Ruhfel B">B Ruhfel</name></author><author><name sortKey="Wafula, E" uniqKey="Wafula E">E Wafula</name></author><author><name sortKey="Der, Jp" uniqKey="Der J">JP Der</name></author><author><name sortKey="Graham, Sw" uniqKey="Graham S">SW Graham</name></author><author><name sortKey="Mathews, S" uniqKey="Mathews S">S Mathews</name></author><author><name sortKey="Melkonian, M" uniqKey="Melkonian M">M Melkonian</name></author><author><name sortKey="Soltis, De" uniqKey="Soltis D">DE Soltis</name></author><author><name sortKey="Soltis, Ps" uniqKey="Soltis P">PS Soltis</name></author><author><name sortKey="Miles, Nw" uniqKey="Miles N">NW Miles</name></author><author><name sortKey="Rothfels, C" uniqKey="Rothfels C">C 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Chen</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Matasci, N" uniqKey="Matasci N">N Matasci</name></author><author><name sortKey="Mckay, Sj" uniqKey="Mckay S">SJ McKay</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Minie, M" uniqKey="Minie M">M Minie</name></author><author><name sortKey="Chopra, G" uniqKey="Chopra G">G Chopra</name></author><author><name sortKey="Sethi, G" uniqKey="Sethi G">G Sethi</name></author><author><name sortKey="Horst, J" uniqKey="Horst J">J Horst</name></author><author><name sortKey="White, G" uniqKey="White G">G White</name></author><author><name sortKey="Roy, A" uniqKey="Roy A">A Roy</name></author><author><name sortKey="Hatti, K" uniqKey="Hatti K">K Hatti</name></author><author><name sortKey="Samudrala, R" uniqKey="Samudrala R">R Samudrala</name></author></analytic></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Sayou, C" uniqKey="Sayou C">C Sayou</name></author><author><name sortKey="Monniaux, M" uniqKey="Monniaux M">M Monniaux</name></author><author><name sortKey="Nanao, Mh" uniqKey="Nanao M">MH Nanao</name></author><author><name sortKey="Moyroud, E" uniqKey="Moyroud E">E Moyroud</name></author><author><name sortKey="Brockington, Sf" uniqKey="Brockington S">SF Brockington</name></author><author><name sortKey="Thevenon, E" uniqKey="Thevenon E">E Thévenon</name></author><author><name sortKey="Chahtane, H" uniqKey="Chahtane H">H Chahtane</name></author><author><name sortKey="Warthmann, N" uniqKey="Warthmann N">N Warthmann</name></author><author><name sortKey="Melkonian, M" uniqKey="Melkonian M">M Melkonian</name></author><author><name sortKey="Zhang, Y" uniqKey="Zhang Y">Y Zhang</name></author><author><name sortKey="Wong, Gk" uniqKey="Wong G">GK Wong</name></author><author><name sortKey="Weigel, D" uniqKey="Weigel D">D Weigel</name></author><author><name sortKey="Parcy, F" uniqKey="Parcy F">F Parcy</name></author><author><name sortKey="Dumas, R" uniqKey="Dumas R">R Dumas</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Klapoetke, Nc" uniqKey="Klapoetke N">NC Klapoetke</name></author><author><name sortKey="Murata, Y" uniqKey="Murata Y">Y Murata</name></author><author><name sortKey="Kim, Ss" uniqKey="Kim S">SS Kim</name></author><author><name sortKey="Pulver, Sr" uniqKey="Pulver S">SR Pulver</name></author><author><name sortKey="Birdsey Benson, A" uniqKey="Birdsey Benson A">A Birdsey-Benson</name></author><author><name sortKey="Cho, Yk" uniqKey="Cho Y">YK Cho</name></author><author><name sortKey="Morimoto, Tk" uniqKey="Morimoto T">TK Morimoto</name></author><author><name sortKey="Chuong, As" uniqKey="Chuong A">AS Chuong</name></author><author><name sortKey="Carpenter, Ej" uniqKey="Carpenter E">EJ Carpenter</name></author><author><name sortKey="Tian, Z" uniqKey="Tian Z">Z Tian</name></author><author><name sortKey="Wang, J" uniqKey="Wang J">J Wang</name></author><author><name sortKey="Xie, Y" uniqKey="Xie Y">Y Xie</name></author><author><name sortKey="Yan, Z" uniqKey="Yan Z">Z Yan</name></author><author><name sortKey="Zhang, Y" uniqKey="Zhang Y">Y Zhang</name></author><author><name sortKey="Chow, By" uniqKey="Chow B">BY Chow</name></author><author><name sortKey="Surek, B" uniqKey="Surek B">B Surek</name></author><author><name sortKey="Melkonian, M" uniqKey="Melkonian M">M Melkonian</name></author><author><name sortKey="Jayaraman, V" uniqKey="Jayaraman V">V Jayaraman</name></author><author><name sortKey="Constantine Paton, M" uniqKey="Constantine Paton M">M Constantine-Paton</name></author><author><name sortKey="Wong, Gk" uniqKey="Wong G">GK Wong</name></author><author><name sortKey="Boyden, Es" uniqKey="Boyden E">ES Boyden</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Allemagne</li><li>Canada</li><li>Espagne</li><li>France</li><li>République populaire de Chine</li><li>États-Unis</li></country><region><li>Arizona</li><li>Bavière</li><li>Caroline du Nord</li><li>Communauté de Madrid</li><li>District de Cologne</li><li>District de Haute-Bavière</li><li>Floride</li><li>Guangdong</li><li>Illinois</li><li>Michigan</li><li>Midi-Pyrénées</li><li>Occitanie (région administrative)</li><li>Rhénanie-du-Nord-Westphalie</li><li>Washington (État)</li></region><settlement><li>Cologne</li><li>Munich</li><li>Seattle</li><li>Shenzhen</li></settlement><orgName><li>Université Louis-et-Maximilien de Munich</li><li>Université de Cologne</li><li>Université de Washington</li></orgName></list><tree><country name="États-Unis"><region name="Arizona"><name sortKey="Matasci, Naim" sort="Matasci, Naim" uniqKey="Matasci N" first="Naim" last="Matasci">Naim Matasci</name></region><name sortKey="Ayyampalayam, Saravanaraj" sort="Ayyampalayam, Saravanaraj" uniqKey="Ayyampalayam S" first="Saravanaraj" last="Ayyampalayam">Saravanaraj Ayyampalayam</name><name sortKey="Barker, Michael" sort="Barker, Michael" uniqKey="Barker M" first="Michael" last="Barker">Michael Barker</name><name sortKey="Baucom, Regina S" sort="Baucom, Regina S" uniqKey="Baucom R" first="Regina S" last="Baucom">Regina S. 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Carpenter</name></noRegion><name sortKey="Deyholos, Michael K" sort="Deyholos, Michael K" uniqKey="Deyholos M" first="Michael K" last="Deyholos">Michael K. Deyholos</name><name sortKey="Graham, Sean W" sort="Graham, Sean W" uniqKey="Graham S" first="Sean W" last="Graham">Sean W. Graham</name><name sortKey="Philippe, Herve" sort="Philippe, Herve" uniqKey="Philippe H" first="Hervé" last="Philippe">Hervé Philippe</name><name sortKey="Rothfels, Carl" sort="Rothfels, Carl" uniqKey="Rothfels C" first="Carl" last="Rothfels">Carl Rothfels</name><name sortKey="Roure, Beatrice" sort="Roure, Beatrice" uniqKey="Roure B" first="Béatrice" last="Roure">Béatrice Roure</name><name sortKey="Wong, Gane Ka Shu" sort="Wong, Gane Ka Shu" uniqKey="Wong G" first="Gane Ka-Shu" last="Wong">Gane Ka-Shu Wong</name><name sortKey="Wong, Gane Ka Shu" sort="Wong, Gane Ka Shu" uniqKey="Wong G" first="Gane Ka-Shu" last="Wong">Gane Ka-Shu Wong</name></country><country name="France"><region name="Occitanie (région administrative)"><name sortKey="Philippe, Herve" sort="Philippe, Herve" uniqKey="Philippe H" first="Hervé" last="Philippe">Hervé Philippe</name></region></country><country name="Allemagne"><region name="Rhénanie-du-Nord-Westphalie"><name sortKey="Surek, Barbara" sort="Surek, Barbara" uniqKey="Surek B" first="Barbara" last="Surek">Barbara Surek</name></region><name sortKey="Melkonian, Michael" sort="Melkonian, Michael" uniqKey="Melkonian M" first="Michael" last="Melkonian">Michael Melkonian</name><name sortKey="Villarreal, Juan Carlos" sort="Villarreal, Juan Carlos" uniqKey="Villarreal J" first="Juan Carlos" last="Villarreal">Juan Carlos Villarreal</name></country><country name="Espagne"><region name="Communauté de Madrid"><name sortKey="Pokorny, Lisa" sort="Pokorny, Lisa" uniqKey="Pokorny L" first="Lisa" last="Pokorny">Lisa Pokorny</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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